miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|66272493|gb|DR008349.1|DR008349 ATCATTTTATTTCCCGTCAGCCCATATTTTTCCAGATTAAAATCAAATTAACGAGAAAATCCAAAGTCGACCGAATCGTT
AAAATAATATTACAGATGTTTATTATCTACTTTAGAATTGTTTTTTAAATCCAATTTAGAACCCAAATTTAGTCTTCATC
GGTGCAGATAATAATTTTATGTCCCTCGAGCAGAAAACAGAATATCCAATCTATCGGACGAGAGATGCTTCAGTTGTTGG
CAGTTAGTCGCTGTCGCTATCACTGCTGCTGCTGCTGCTGCTGCTACTGCTGCTGCTGCTGGAATCCGAGTCGGTAATCA
GCTTGCCCTTGAGGGTCTCCTGGTCGAAGATGTATTCACCCAACTTCGTTGTGCATTTCTTCAGGATGGTCACATACTTG
CCGAGCTTCTTGATCACAATAACCTGCTTGCAAATGTAGTCGTTCACCCGTTTCTCCATATGTGGATCCGCGTACTTGAT
GCACAATTTGTGCAACTCATGCAGATTCTCGATCAGGTTCTTCTGCAGGTCCAGAGCAAACAGCATTGCATCCACGCCGT
TTCCCCAAGTACGAACACTCGGTTTCTTAATGTCAAAAAGAACAACGCGACCACCACGCCTGTTCATGATCTTGCCCAGT
TCCAAGGCACATCCCAGCTCCACATCGGCGCAATCCATGAAGAACTTGGAGAATCCAGGCAGAGCAGCATCGCAACTATC
GAAGTGGAACGACATGGACCGGTACGTGTAAGCGCCGGTTAGCTCCAGATTGATCAACT




Most similar to sp|P42577|FRIS_LYMST

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P42577|FRIS_LYMST Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2
          Length = 174

 Score =  135 bits (339), Expect = 4e-31
 Identities = 71/149 (47%), Positives = 102/149 (68%), Gaps = 1/149 (0%)
 Frame = -3

Query: 774 INLELTGAYTYRSMSFHFDSCDAALPGFSKFFMDCADVELGCALELGKIMNRRGGRVVLF 595
           IN+EL  +Y+Y+SM+++FD  D ALPGF KFF   ++ E   A +L K  N+RGGR+VL 
Sbjct: 22  INMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQ 81

Query: 594 DIKKPSVRTWGNGVDAMLFALDLQKNLIENLHELHKLCIKYADPHMEKRV-NDYICKQVI 418
           DIKKP    WG G++AM  AL L+K++ ++L +LHKLC  + D  M   + ++++ +QV 
Sbjct: 82  DIKKPDRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVK 141

Query: 417 VIKKLGKYVTILKKCTTKLGEYIFDQETL 331
            IK+L  Y+T LK+    LGEYIFD+ETL
Sbjct: 142 SIKELSDYITNLKRVGPGLGEYIFDKETL 170